Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838630.1_cds_XP_016507036.1_20201
CDS Infomation

[gene=LOC107824743] [db_xref=GeneID:107824743] [protein=vinorine synthase-like] [protein_id=XP_016507036.1] [location=complement(11631..12971)] [gbkey=CDS]
Sequence

ATGGAAAGAAAGATTGAGATTGTTTGTGTGGAGTTCATTAAACCTGTTTCTCGCACTCCC
AGTCACCTTAAATGCTTCGAATTCTCTATTTTGGATCAACACGTACTAACCATACCTGTT
CCCTTAGCTCTATTTTATCCTCCTCCTCCCCTGTATGTTGGCGAATCGCTGCGGGCAGCT
AATTTATCAAGATTACTTGTATTGAAGAAATCTTTGTCTGAAACACTTGCTCGCTTTTAC
CCTTTTGCTGGTCGAATCAAGAACAACTCAATTGAATGCAACGACGATGTGGTGCCTTTT
TACGAGGCTTTTGCTCATAATTATCAGTTGGAAGATGTTCTTAGAAAGGCTGCAGATGTC
AATAAAAAGTTCCTCCCCAGTACTGTTGAAGAGGCCCGATCATTACTGCCTGATTCAGCC
TTATATCCTCCCCTGCTTGTTCAAGTCACTTTTTTTGAGTGTGGAAGTATGGCTATTGGT
ATATGTGCTTCTCACAAAGTTGCTGATCGTGCCACATTGTGCACCCTCATCAGTGCCTGG
TCAACAATTGCCCGAGGTAGCCCCGATTATCTGGTTCCCGAATTTGTTGCAGCTGCTAAA
TTCTTGCCACCACCAATTTCCCATGTTCCACCCAAGCCTATTATGCCTGAAGTAATAATC
AAAGTCCTTTTTGATAAGCAACGTGTCACTAAAATTTTTGCCTTTGATGCTTCAACTATA
ACATCACTCAAGGGTAAGGCTGTCAGCGGTTCAGTACAAGCGCCTACTCGTGTTGAAGTA
GTATCAGCTTTGATCTGGAAATGTGCCATGGTTGTTTCAGGGAATGAGATCAGAAGGTTA
TCTCAATTGGTGCACAATGTAAATATACGAAAGAGGTTAGTCCCTCCGTTACCAAACCAT
AGTGTAGGAAACGTTGTTGCAATTAGCACAGCATGTAAAGGTGAGAATGATGGCTCTGAT
TTGCTCACTTTGGTCACTTGTATAAGGAAAGCATTATCAGAAATGAGTTCAGAATTTGCG
GATAAACAGAATCAACAAGAGGCAATTTTGACCATTCCCTATGTCAACGCAGAGTTTGCT
GCAGCACGTTTTGGAGGCGAGATAGAGATAATACATATGAGTAGCTTGTGTGGCTACCAA
TTTTATGATGTTGATTTTGGCTGGGGAAGACCTTCATGGGTAAATCCAATTAAAGATATA
GGCATAAATGTTGTTATATTGATGGATTCAAGAGATAGTGGTGGAGTAGACGCATGGATA
TGCTTGAAGGACAAAGACAGTATGACAGTTTTTGAGCATGAGCTAGAGCTGCAGCTGCTT
GCATTTGGATCTGCCAAATAA

Peptide Sequence

PEP ID

XP_016507036.1
PEP Infomation

PREDICTED: vinorine synthase-like [Nicotiana tabacum]
Sequence

MERKIEIVCVEFIKPVSRTPSHLKCFEFSILDQHVLTIPVPLALFYPPPPLYVGESLRAA
NLSRLLVLKKSLSETLARFYPFAGRIKNNSIECNDDVVPFYEAFAHNYQLEDVLRKAADV
NKKFLPSTVEEARSLLPDSALYPPLLVQVTFFECGSMAIGICASHKVADRATLCTLISAW
STIARGSPDYLVPEFVAAAKFLPPPISHVPPKPIMPEVIIKVLFDKQRVTKIFAFDASTI
TSLKGKAVSGSVQAPTRVEVVSALIWKCAMVVSGNEIRRLSQLVHNVNIRKRLVPPLPNH
SVGNVVAISTACKGENDGSDLLTLVTCIRKALSEMSSEFADKQNQQEAILTIPYVNAEFA
AARFGGEIEIIHMSSLCGYQFYDVDFGWGRPSWVNPIKDIGINVVILMDSRDSGGVDAWI
CLKDKDSMTVFEHELELQLLAFGSAK

Transcript Sequence

Gene sequence data has not been registered.